Template-based Modeling Results for CEDA_ECOLI

Submitted Primary Sequence

>Length 80
MKKPLRQQNRQIISYVPRTEPAPPEHAIKMDSFRDVWMLRGKYVAFVLMGESFLRSPAFTVPESAQRWANQIRQEGEVTE
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--------10--------20--------30--------40--------50--------60--------70--------80

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKPLRQQNRQIISYVPRTEPAPPEHAIKMDSFRDVWMLRGKYVAFVLMGESFLRSPAFTVPESAQRWANQIRQEGEVTE
CCCCHHHCCCCCEEECCCCCCCCCHHHHHHCCCCCEEEECCCEEEEEEECHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKPLRQQNRQIISYVPRTEPAPPEHAIKMDSFRDVWMLRGKYVAFVLMGESFLRSPAFTVPESAQRWANQIRQEGEVTE
54331333333000101322211232001121031000021100000000221221221212310220022133323234
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKPLRQQNRQIISYVPRTEPAPPEHAIKMDSFRDVWMLRGKYVAFVLMGESFLRSPAFTVPESAQRWANQIRQEGEVTE
1	MUSTER	2bn8A	1.000	0.838	3.341	threading_1	-------------SYVPRTEPAPPEHAIKMDSFRDVWMLRGKYVAFVLMGESFLRSPAFTVPESAQRWANQIRQEGEVTE
2	SPARKS	2d35a	1.000	0.775	2.813	threading_2	------------------TEPAPPEHAIKMDSFRDVWMLRGKYVAFVLMGESFLRSPAFTVPESAQRWANQIRQEGEVTE
3	PROSPECT2	2bn8A	1.000	0.838	1.232	threading_3	-------------SYVPRTEPAPPEHAIKMDSFRDVWMLRGKYVAFVLMGESFLRSPAFTVPESAQRWANQIRQEGEVTE
4	PPA-I	2bn8A	1.000	0.838	4.863	threading_4	-------------SYVPRTEPAPPEHAIKMDSFRDVWMLRGKYVAFVLMGESFLRSPAFTVPESAQRWANQIRQEGEVTE
5	HHPRED-l	2bn8_A	1.000	0.825	10.618	threading_5	-------------SYVPRTEPAPPEHAIKMDSFRDVWMLRGKYVAFVLMGESFLRSPAFTVPESAQRWANQIRQEGEVT-
6	HHPRED-g	2bn8_A	1.000	0.838	8.314	threading_6	-------------SYVPRTEPAPPEHAIKMDSFRDVWMLRGKYVAFVLMGESFLRSPAFTVPESAQRWANQIRQEGEVTE
7	SP3	2d35a	1.000	0.775	1.826	threading_7	------------------TEPAPPEHAIKMDSFRDVWMLRGKYVAFVLMGESFLRSPAFTVPESAQRWANQIRQEGEVTE
8	SAM-T99	2bn8A	1.000	0.838	6.401	threading_8	-------------SYVPRTEPAPPEHAIKMDSFRDVWMLRGKYVAFVLMGESFLRSPAFTVPESAQRWANQIRQEGEVTE
9	MUSTER	2d35A	1.000	0.775	2.736	threading_9	------------------TEPAPPEHAIKMDSFRDVWMLRGKYVAFVLMGESFLRSPAFTVPESAQRWANQIRQEGEVTE
10	SPARKS	1pk1b	0.188	0.863	0.691	threading_10	RSQPIDWTIEEVIQYIESNDNSLAVH---GDLFRKHEI-DGK--ALLRLNERMMKYMGLKL-GPALKICNLVNKVN----

Predicted Tertiary Structure


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TM-score=0.491 to 3gccA SCOP code=d.10.1.2	TM-score=0.491 to 3gccA SCOP code=d.10.1.2	TM-score=0.469 to 3gccA SCOP code=d.10.1.2	TM-score=0.491 to 3gccA SCOP code=d.10.1.2	TM-score=0.491 to 3gccA SCOP code=d.10.1.2