Template-based Modeling Results for ALPA_ECOLI

Submitted Primary Sequence

>Length 70
MNNRSAVRILRLPAVIQKTGMARATIYDWLNPKSPRYDATFPKKRMLGVKSVGWIEAEIDEWLSQRCKLI
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--------10--------20--------30--------40--------50--------60--------70

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNNRSAVRILRLPAVIQKTGMARATIYDWLNPKSPRYDATFPKKRMLGVKSVGWIEAEIDEWLSQRCKLI
CCCCCCCCEECHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEEHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNNRSAVRILRLPAVIQKTGMARATIYDWLNPKSPRYDATFPKKRMLGVKSVGWIEAEIDEWLSQRCKLI
5534222210103101320101100011103232232312013211001200000010012002310422
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNNRSAVRILRLPAVIQKTGMARATIYDWLNPKSPRYDATFPKKRMLGVKSVGWIEAEIDEWLSQRCKLI
1	MUSTER	1z4hA	0.159	0.900	1.526	threading_1	QHELQPDSLVDLKFIMADTGFGKTFIYDRIKS------GDLPKAKVIHGR-ARWLYRDHCEFKNKLLSRA
2	SPARKS	1z4ha	0.159	0.900	1.407	threading_2	QHELQPDSLVDLKFIMADTGFGKTFIYDRIKS------GDLPKAKVIHGRA-RWLYRDHCEFKNKLLSRA
3	PROSPECT2	1z4hA	0.175	0.900	0.724	threading_3	MQHEQPDSLVDLKFIMADTGFGKTFIYDRIK------SGDLPKAKVIHGRA-RWLYRDHCEFKNKLLSRA
4	PPA-I	1z4hA	0.159	0.900	2.352	threading_4	QHELQPDSLVDLKFIMADTGFGKTFIYDRIKS------GDLPKAKVIHGR-ARWLYRDHCEFKNKLLSRA
5	HHPRED-l	1z4h_A	0.161	0.886	3.833	threading_5	QHELQPDSLVDLKFIMADTGFGKTFIYDRIK------SGDLPKAKVIHGRA-RWLYRDHCEFKNKLLSR-
6	HHPRED-g	1z4h_A	0.175	0.900	3.416	threading_6	MQHEQPDSLVDLKFIMADTGFGKTFIYDRIK------SGDLPKAKVIHGRA-RWLYRDHCEFKNKLLSRA
7	SP3	1z4ha	0.159	0.900	0.975	threading_7	QHELQPDSLVDLKFIMADTGFGKTFIYDRIKS------GDLPKAKVIHGRA-RWLYRDHCEFKNKLLSRA
8	SAM-T99	1z4hA	0.159	0.900	1.016	threading_8	QHELQPDSLVDLKFIMADTGFGKTFIYDRIK------SGDLPKAKVIHGRA-RWLYRDHCEFKNKLLSRA
9	MUSTER	2kvvA	0.108	0.929	1.111	threading_9	MAQIFNEEWMVEKALMVRTGLGARQIESYRQGAWIEPSGE-KTL----RGTTWYNYPEINKFIRDSLEHH
10	SPARKS	2kvva	0.125	0.914	1.020	threading_10	MAQIFNEEWMVEKALMVRTGLGARQIESYRQGAWIEPSGE-KTL-----RGTTWYYPEINKFIRDSLEHH

Predicted Tertiary Structure


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TM-score=0.498 to 1djiB SCOP code=a.39.1.7	TM-score=0.496 to 3d6yA SCOP code=a.6.1.3	TM-score=0.502 to 3d6yA SCOP code=a.6.1.3	TM-score=0.515 to 3d6yA SCOP code=a.6.1.3	TM-score=0.498 to 1djiB SCOP code=a.39.1.7