QUARK Ab Initio Results for YPJC_ECOLI

Submitted Primary Sequence

>Length 160
MLVSKSNGFNASAVLGSGSYNENKSSKHMELLAHSILKLICKEAASETYRGALETLQKMMSECIYQEGNAFVIMGAGEQLKRIKYEVGENNLKVFNVHFNNNHELVSSGEPDVICLSKQVWENLLIKLKLENNENVFSETKKLSNKNNADQFFECAKRNE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MLVSKSNGFNASAVLGSGSYNENKSSKHMELLAHSILKLICKEAASETYRGALETLQKMMSECIYQEGNAFVIMGAGEQLKRIKYEVGENNLKVFNVHFNNNHELVSSGEPDVICLSKQVWENLLIKLKLENNENVFSETKKLSNKNNADQFFECAKRNE
CCCTTTTTTTEEETTTTTTTTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCEEEEECCCHHHHHEEECCCCCCEEEEEEETTTTTEEECTTTTCEEEEEHHHHHHHHHHHCTTTTHHHHHHHHHHCTTTTHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLVSKSNGFNASAVLGSGSYNENKSSKHMELLAHSILKLICKEAASETYRGALETLQKMMSECIYQEGNAFVIMGAGEQLKRIKYEVGENNLKVFNVHFNNNHELVSSGEPDVICLSKQVWENLLIKLKLENNENVFSETKKLSNKNNADQFFECAKRNE
5523323222000000212023332231020001100200022002411310120023002102133110000100121031021212422010000002222100132212000011300220013021333321122033223322032012023444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.439 to 1j5wB SCOP code=d.104.1.1	TM-score=0.472 to 2p1xA SCOP code=d.82.2.1	TM-score=0.480 to 1eqbB SCOP code=c.67.1.4	TM-score=0.491 to 2ff4A SCOP code=a.4.6.1	TM-score=0.451 to 1kafA SCOP code=d.199.1.1

Estimated TM-score of Model 1: 0.3259 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3624 ±0.0778