QUARK Ab Initio Results for YOBD_ECOLI


  Submitted Primary Sequence

>Length 152
MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYNNVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLVSTQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYNNVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLVSTQ
CCHHHHHHHHHHHHHHHHHHHHHHHCCTTTTCEEEEEEETTTTCCCHHHHHHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHHHHHCCCEEEEETTTTEEEEEEEEHHHHHEEEETTTTEEEEETTTTTEEEECCCHHHHHHHHHHHTTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYNNVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLVSTQ
45120000000000000000001001132312100101012324110000000000000110232222010000000000000001121010002230000000002012020020133100001024220002032230023003111234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.481 to 1r5zA
SCOP code=f.40.1.1
TM-score=0.440 to 1zvrA
SCOP code=b.55.1.8
TM-score=0.470 to 2qzgB
SCOP code=a.29.14.1
TM-score=0.462 to 2gq3A
SCOP code=c.1.13.1
TM-score=0.479 to 2ga5A
SCOP code=d.82.2.1
Estimated TM-score of Model 1: 0.3370 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3743 ±0.0778