QUARK Ab Initio Results for YMFQ_ECOLI

Submitted Primary Sequence

>Length 194
MDVTNDDYIRLLSALLPPGPVWSASDPAIAGAAPSLTRVHQRADALMRELDPRTTTELINRWERLCGLPDECIPAGTQTLRQRQQRLDAKVNLAGGINEDFYLAQLAALGRPDATITRYDKSTFTCSSACTDAVNAPEWRYYWQVNMPATTNSTWMTCGDPCDSALRIWGDTVVECVLNKLCPSHTYVIFKYPE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MDVTNDDYIRLLSALLPPGPVWSASDPAIAGAAPSLTRVHQRADALMRELDPRTTTELINRWERLCGLPDECIPAGTQTLRQRQQRLDAKVNLAGGINEDFYLAQLAALGRPDATITRYDKSTFTCSSACTDAVNAPEWRYYWQVNMPATTNSTWMTCGDPCDSALRIWGDTVVECVLNKLCPSHTYVIFKYPE
CCCCHHHHHHHHHHHCCCCCCTTTTTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCTTTTCTTTTTTHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCTTTTEEEEEECCTTTTCTTTTTTTTTTTTTEEEEETTTTTTEEEEECCCTTTTTCCCCCCHHHHHHHHHHHTTTTTEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDVTNDDYIRLLSALLPPGPVWSASDPAIAGAAPSLTRVHQRADALMRELDPRTTTELINRWERLCGLPDECIPAGTQTLRQRQQRLDAKVNLAGGINEDFYLAQLAALGRPDATITRYDKSTFTCSSACTDAVNAPEWRYYWQVNMPATTNSTWMTCGDPCDSALRIWGDTVVECVLNKLCPSHTYVIFKYPE
55121220120011000201012222310100020013013301200320113002200310121020233122222322320022002201411111030010003111222010210121112011102100113201000000022220000001122031112212220000002401111010001136
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.420 to 7pckA SCOP code=d.3.1.1	TM-score=0.409 to 1gpjA SCOP code=a.151.1.1	TM-score=0.408 to 2r2vA SCOP code=h.1.3.1	TM-score=0.452 to 1z0jB SCOP code=a.2.19.1	TM-score=0.443 to 3cmaV SCOP code=i.1.1.2

Estimated TM-score of Model 1: 0.3334 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3704 ±0.0778