QUARK Ab Initio Results for YJJP_ECOLI


  Submitted Primary Sequence

>Length 256
MQTEQQRAVTRLCIQCGLFLLQHGAESALVDELSSRLGRALGMDSVESSISSNAIVLTTIKDGQCLTSTRKNHDRGINMHVVTEVQHIVILAEHHLLDYKGVEKRFSQIQPLRYPRWLVALMVGLSCACFCKLNNGGWDGAVITFFASTTAMYIRQLLAQRHLHPQINFCLTAFAATTISGLLLQLPTFSNTPTIAMAASVLLLVPGFPLINAVADMFKGHINTGLARWAIASLLTLATCVGVVMALTIWGLRGWV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MQTEQQRAVTRLCIQCGLFLLQHGAESALVDELSSRLGRALGMDSVESSISSNAIVLTTIKDGQCLTSTRKNHDRGINMHVVTEVQHIVILAEHHLLDYKGVEKRFSQIQPLRYPRWLVALMVGLSCACFCKLNNGGWDGAVITFFASTTAMYIRQLLAQRHLHPQINFCLTAFAATTISGLLLQLPTFSNTPTIAMAASVLLLVPGFPLINAVADMFKGHINTGLARWAIASLLTLATCVGVVMALTIWGLRGWV
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCTTTTEEEETTTTEEEEETTTTTEEEEEEETTTTTTTHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCTTTTCHHHHHHHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCTTTTCHHHHHHHHHHHHTTTTHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MQTEQQRAVTRLCIQCGLFLLQHGAESALVDELSSRLGRALGMDSVESSISSNAIVLTTIKDGQCLTSTRKNHDRGINMHVVTEVQHIVILAEHHLLDYKGVEKRFSQIQPLRYPRWLVALMVGLSCACFCKLNNGGWDGAVITFFASTTAMYIRQLLAQRHLHPQINFCLTAFAATTISGLLLQLPTFSNTPTIAMAASVLLLVPGFPLINAVADMFKGHINTGLARWAIASLLTLATCVGVVMALTIWGLRGWV
4543113100200020020013110201100200110041020210100000100000013333100001203332111300110120012033321213102310230232402300000000000000010130211000000000000100120012221120001000000000000000201112111100000000100000000100020030101000010010000000000000000001113123
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.463 to 1i5nD
SCOP code=a.24.10.3		 TM-score=0.488 to 3dbyT
SCOP code=a.29.13.1		 TM-score=0.487 to 1xvhA
SCOP code=a.8.1.2		 TM-score=0.488 to 1z0kB
SCOP code=a.2.19.1		 TM-score=0.471 to 1whuA
SCOP code=a.4.9.1
Estimated TM-score of Model 1: 0.5041 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.5531 ±0.0778