QUARK Ab Initio Results for YIIQ_ECOLI

Submitted Primary Sequence

>Length 199
MKPGCTLFFLLCSALTVTTEAHAQTPDTATTAPYLLAGAPTFDLSISQFREDFNSQNPSLPLNEFRAIDSSPDKANLTRAASKINENLYASTALERGTLKIKSIQMTWLPIQGPEQKAAKAKAQEYMAAVIRTLTPLMTKTQSQKKLQSLLTAGKNKRYYTETEGALRYVVADNGEKGLTFAVEPIKLALSESLEGLNK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKPGCTLFFLLCSALTVTTEAHAQTPDTATTAPYLLAGAPTFDLSISQFREDFNSQNPSLPLNEFRAIDSSPDKANLTRAASKINENLYASTALERGTLKIKSIQMTWLPIQGPEQKAAKAKAQEYMAAVIRTLTPLMTKTQSQKKLQSLLTAGKNKRYYTETEGALRYVVADNGEKGLTFAVEPIKLALSESLEGLNK
CCCHHHHHHHHHHHHHCCHHHTTTTTTTCTTTTHHTTTTCTTTTCHHHHHHHHHHTTTTTCHHHEEEEETTTTTTTHHHHHHHHHHHHHHHHHHTTTTTTEEEEEEEEETTTTTHHHHHHHHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHCTTTTCCCETTTTTEEEEEETTTTTEEEEEEEEEEEHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Solvent Accessibility

>0-buried to 9-exposed
MKPGCTLFFLLCSALTVTTEAHAQTPDTATTAPYLLAGAPTFDLSISQFREDFNSQNPSLPLNEFRAIDSSPDKANLTRAASKINENLYASTALERGTLKIKSIQMTWLPIQGPEQKAAKAKAQEYMAAVIRTLTPLMTKTQSQKKLQSLLTAGKNKRYYTETEGALRYVVADNGEKGLTFAVEPIKLALSESLEGLNK
5431000010000000012312232242222011001201212110020131033413301120010011332402002001301220000101432222010010100224233121121101200000022012212322013102101322334222221200000000233330000001100001222132244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.432 to 2axdS SCOP code=a.237.1.1	TM-score=0.446 to 1kt1A SCOP code=a.118.8.1	TM-score=0.442 to 1l7vA SCOP code=f.22.1.1	TM-score=0.423 to 2gfnB SCOP code=a.4.1.9	TM-score=0.463 to 2pjqB SCOP code=a.211.1.1

Estimated TM-score of Model 1: 0.2943 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3286 ±0.0778