QUARK Ab Initio Results for YGIB_ECOLI

Submitted Primary Sequence

>Length 223
MKRTKSIRHASFRKNWSARHLTPVALAVATVFMLAGCEKSDETVSLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPAQAGMAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKYTDATGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRSATGTSSRSMGG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKRTKSIRHASFRKNWSARHLTPVALAVATVFMLAGCEKSDETVSLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPAQAGMAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKYTDATGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRSATGTSSRSMGG
CCCTTTTCHHHHHHTTTTTHHHHHHHHHHHHHHHHCCCCCTTTTEETTTTHHHHHHTTTTHHHHHHHHHHHHHHHHHHCCCTTTTHHHHHHHTTTTTTTTTTTTTTCCCCCCCCTTTTTTTTHHHHHHHHHHHHHHCTTTTTTCCCCTTTTTCCTTTTTTTTTTTTECTTTTTTTCEEETTTTTTCCCCCEEEEECTTTTCTTTTTTTTTTCCCCCCTTTTCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKRTKSIRHASFRKNWSARHLTPVALAVATVFMLAGCEKSDETVSLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPAQAGMAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKYTDATGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRSATGTSSRSMGG
5532422322203412212200000000000000110342332110022021013243131210120023003202320232222310112014120220123222222122213322110000000000001011112111221112132221212120011213211223213111113222233222101011211132113212124222222232334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.413 to 1y6dA SCOP code=a.24.10.5	TM-score=0.413 to 2evsA SCOP code=a.224.1.1	TM-score=0.408 to 2vn0A SCOP code=a.104.1.1	TM-score=0.405 to 1aisB SCOP code=a.74.1.2	TM-score=0.438 to 2c0mC SCOP code=a.118.8.1

Estimated TM-score of Model 1: 0.2946 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3289 ±0.0778