QUARK Ab Initio Results for YGGE_ECOLI

Submitted Primary Sequence

>Length 246
MKFKVIALAALMGISGMAAQANELPDGPHIVTSGTASVDAVPDIATLAIEVNVAAKDAATAKKQADERVAQYISFLELNQIAKKDISSANLRTQPDYDYQDGKSILKGYRAVRTVEVTLRQLDKLNSLLDGALKAGLNEIRSVSLGVAQPDAYKDKARKAAIDNAIHQAQELANGFHRKLGPVYSVRYHVSNYQPSPMVRMMKADAAPVSAQETYEQAAIQFDDQVDVVFQLEPVDQQPAKTPAAQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKFKVIALAALMGISGMAAQANELPDGPHIVTSGTASVDAVPDIATLAIEVNVAAKDAATAKKQADERVAQYISFLELNQIAKKDISSANLRTQPDYDYQDGKSILKGYRAVRTVEVTLRQLDKLNSLLDGALKAGLNEIRSVSLGVAQPDAYKDKARKAAIDNAIHQAQELANGFHRKLGPVYSVRYHVSNYQPSPMVRMMKADAAPVSAQETYEQAAIQFDDQVDVVFQLEPVDQQPAKTPAAQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEETTTTTEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEEEEEEETTTTTTEEEEEEEEEEEEEEETTTTHHHHHHHHHHHHCCCCTTTTTEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTTCEEEETTTTTTTTTTTHHHHHHHHCCCCCCCCCCTTTTTEEEEEEEEEEEEETTTTCCCCCTTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

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Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKFKVIALAALMGISGMAAQANELPDGPHIVTSGTASVDAVPDIATLAIEVNVAAKDAATAKKQADERVAQYISFLELNQIAKKDISSANLRTQPDYDYQDGKSILKGYRAVRTVEVTLRQLDKLNSLLDGALKAGLNEIRSVSLGVAQPDAYKDKARKAAIDNAIHQAQELANGFHRKLGPVYSVRYHVSNYQPSPMVRMMKADAAPVSAQETYEQAAIQFDDQVDVVFQLEPVDQQPAKTPAAQ
421110000000000000022242332220201020213021110100010212232022023202310220021034231233100000020111122443421020020111020202203201200100141211202201010221320132013100220131022003104330120000223222222021010010211322233223412020202010101012233332433235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.454 to 1ml8A SCOP code=d.227.1.2	TM-score=0.435 to 2r2vA SCOP code=h.1.3.1	TM-score=0.440 to 1ml8A SCOP code=d.227.1.2	TM-score=0.397 to 2a9zA SCOP code=c.72.1.1	TM-score=0.440 to 1tuaA SCOP code=d.51.1.1

Estimated TM-score of Model 1: 0.3630 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4020 ±0.0778