QUARK Ab Initio Results for YFJN_ECOLI

Submitted Primary Sequence

>Length 357
MTIRSYKNLNLVRANIETESRQFIENKNYSIQSIGPMPGSRAGLRVVFTRPGVNLATVDIFYNGDGSTTIQYLTGANRSLGQELADHLFETINPAEFEQVNMVLQGFVETSVLPVLELSADESHIEFREHSRNAHTVVWKIISTSYQDELTVSLHITTGKLQIQGRPLSCYRVFTFNLAALLDLQGLEKVLIRQEDGKANIVQQEVARTYLQTVMADAYPHLHVTAEKLLVSGLCVKLAAPDLPDYCMLLYPELRTIEGVLKSKMSGLGMPVQQPAGFGTYFDKPAAHYILKPQFAATLRPEQINIISTAYTFFNVERHSLFHMETVVDASRMISDMARLMGKATRAWGIIKDLYIV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MTIRSYKNLNLVRANIETESRQFIENKNYSIQSIGPMPGSRAGLRVVFTRPGVNLATVDIFYNGDGSTTIQYLTGANRSLGQELADHLFETINPAEFEQVNMVLQGFVETSVLPVLELSADESHIEFREHSRNAHTVVWKIISTSYQDELTVSLHITTGKLQIQGRPLSCYRVFTFNLAALLDLQGLEKVLIRQEDGKANIVQQEVARTYLQTVMADAYPHLHVTAEKLLVSGLCVKLAAPDLPDYCMLLYPELRTIEGVLKSKMSGLGMPVQQPAGFGTYFDKPAAHYILKPQFAATLRPEQINIISTAYTFFNVERHSLFHMETVVDASRMISDMARLMGKATRAWGIIKDLYIV
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEETTTTCTTTTTTTEEEEECCCCEEEEEEEETTTTTEEEECTTTTTTTHHHHHHHHHHHHCCCTTTTTTTEEETTTTTTTTTHHHHHHCTTTTCEEEEECCCCCCEEEHHHTTTTCTTTTEEEEETTTTTEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHCCCCHHHHHHHHHHHTTTTTTTTHHHHHHHHHHHHHHHHCTTTTTTTTEEHHHHHHHHHHHHHHHHHHCCTTTTTTTTTTTTTTTTTTTEEEEHHHHCCCCHHHHHHHHHHHHHHHCTTTTTTTTTTTTCTTTTTCCHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTIRSYKNLNLVRANIETESRQFIENKNYSIQSIGPMPGSRAGLRVVFTRPGVNLATVDIFYNGDGSTTIQYLTGANRSLGQELADHLFETINPAEFEQVNMVLQGFVETSVLPVLELSADESHIEFREHSRNAHTVVWKIISTSYQDELTVSLHITTGKLQIQGRPLSCYRVFTFNLAALLDLQGLEKVLIRQEDGKANIVQQEVARTYLQTVMADAYPHLHVTAEKLLVSGLCVKLAAPDLPDYCMLLYPELRTIEGVLKSKMSGLGMPVQQPAGFGTYFDKPAAHYILKPQFAATLRPEQINIISTAYTFFNVERHSLFHMETVVDASRMISDMARLMGKATRAWGIIKDLYIV
552421321200121022003200432322010111232242112000122221100000002230000021211113200210020023103203221010003212331022003101332211022224322100130012334210100000221201021322200210010001003122133102323323121223310221023102311220220012000000002112230231000010002001100211022111313322211211333222000123023212230020012002002122000010222112131023022011102201100321223
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.405 to 1iqpA SCOP code=a.80.1.1	TM-score=0.415 to 1tqgA SCOP code=a.24.10.3	TM-score=0.406 to 1j5wB SCOP code=d.104.1.1	TM-score=0.407 to 2nwvA SCOP code=d.326.1.1	TM-score=0.373 to 2idlB SCOP code=d.64.2.1

Estimated TM-score of Model 1: 0.3120 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3476 ±0.0778