QUARK Ab Initio Results for YFIR_ECOLI


  Submitted Primary Sequence

>Length 172
MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTRWPALSGPPKLCIFSSSRFSTALQENAATSLPYLPVIIHTQQEAMISGCNGFYFGNESPTFQMELTEQYPSKALLLIAEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNPDVLMLARKKNDG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTRWPALSGPPKLCIFSSSRFSTALQENAATSLPYLPVIIHTQQEAMISGCNGFYFGNESPTFQMELTEQYPSKALLLIAEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNPDVLMLARKKNDG
CCHHHHHHHHHHHHHHHHHHHCTTTTHHHHHHHHHHHTTTTEETTTTCTTTTEEETTTTHHHHHHHHHCCTTTTCCEEEEEECCCCCCTTTTTEEEECCCCHHHHHHHHHHTTTTCEEEEETTTTTTTTTTEEEEETTTTTEEEEEEHHHHHHCCCEECHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTRWPALSGPPKLCIFSSSRFSTALQENAATSLPYLPVIIHTQQEAMISGCNGFYFGNESPTFQMELTEQYPSKALLLIAEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNPDVLMLARKKNDG
5411110000000000001001232231121011000000100111231220000001114002102322223222010002133322111010000033222101300320333100000223230221000000122310201000200241212001200111343444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.448 to 1bykA
SCOP code=c.93.1.1		 TM-score=0.451 to 1uspA
SCOP code=d.227.1.1		 TM-score=0.442 to 1j7xA
SCOP code=c.14.1.2		 TM-score=0.451 to 1byeA
SCOP code=a.45.1.1		 TM-score=0.478 to 1wpbP
SCOP code=a.233.1.1
Estimated TM-score of Model 1: 0.3183 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3543 ±0.0778