QUARK Ab Initio Results for YFFL_ECOLI

Submitted Primary Sequence

>Length 213
MFATKDPEFENRINTNKSPRNAATCRGRYEKQAKGEFLMSDMLAVEQETNNDVRQFLNKINELRNKAPKNEETKHEEHTPDNHEETDHHEAKQQEQAWRGNLRYLDTLNRLDEVLPRKLYERWEKEHTVNDEAVLRALCYFAGTGKNSQLGWCRVGRGTIDKRARLSKNTVKKCLDRLVNHFKLVERTEGYIPGSAERECNEYQLLFKPYNMK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MFATKDPEFENRINTNKSPRNAATCRGRYEKQAKGEFLMSDMLAVEQETNNDVRQFLNKINELRNKAPKNEETKHEEHTPDNHEETDHHEAKQQEQAWRGNLRYLDTLNRLDEVLPRKLYERWEKEHTVNDEAVLRALCYFAGTGKNSQLGWCRVGRGTIDKRARLSKNTVKKCLDRLVNHFKLVERTEGYIPGSAERECNEYQLLFKPYNMK
CTTTTCHHHHHHCTTTTCTTTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTTTTTTTTTTTTTTTTTCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHTTTTCTTTTEEETTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHTTTTHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFATKDPEFENRINTNKSPRNAATCRGRYEKQAKGEFLMSDMLAVEQETNNDVRQFLNKINELRNKAPKNEETKHEEHTPDNHEETDHHEAKQQEQAWRGNLRYLDTLNRLDEVLPRKLYERWEKEHTVNDEAVLRALCYFAGTGKNSQLGWCRVGRGTIDKRARLSKNTVKKCLDRLVNHFKLVERTEGYIPGSAERECNEYQLLFKPYNMK
553331231222022342132012021311331301100000000122012102200110220343123333232332013323312222022112112010200100220131012300320243121311000000010011132130000000301021103012300330011002002001312120112022202101110222334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.506 to 1lvfA SCOP code=a.47.2.1	TM-score=0.491 to 1ge9A SCOP code=d.67.3.1	TM-score=0.491 to 2r2vA SCOP code=h.1.3.1	TM-score=0.510 to 2rldA SCOP code=a.29.16.1	TM-score=0.472 to 2rldA SCOP code=a.29.16.1

Estimated TM-score of Model 1: 0.3213 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3575 ±0.0778