QUARK Ab Initio Results for YFDL_ECOLI


  Submitted Primary Sequence

>Length 172
MLQEELCSVVEASGASLEKGRHDQLLTALRALLLSRKNPFGDIKLDGTVQKALENLGLGEAAKRNVGTGANQIPDMGSFMLSASVPGYQKLPSGLIIQWGPIDVPLTSQDTVTYFPIAFPNRCLRVFATQDYTPGSANVGYIACAGYNQDPVKFISRAGVPGIGASFFALGC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MLQEELCSVVEASGASLEKGRHDQLLTALRALLLSRKNPFGDIKLDGTVQKALENLGLGEAAKRNVGTGANQIPDMGSFMLSASVPGYQKLPSGLIIQWGPIDVPLTSQDTVTYFPIAFPNRCLRVFATQDYTPGSANVGYIACAGYNQDPVKFISRAGVPGIGASFFALGC
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCTTTTCCEEEECTTTTTTTTTTTTETTTTTTEEETTTTEEEEEEEEEETTTTTTTEEEEEETTTTTTTTEEEETTTTTTTTTTCEEEEEEEEEEEEEEEETTTTTTTTTEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MLQEELCSVVEASGASLEKGRHDQLLTALRALLLSRKNPFGDIKLDGTVQKALENLGLGEAAKRNVGTGANQIPDMGSFMLSASVPGYQKLPSGLIIQWGPIDVPLTSQDTVTYFPIAFPNRCLRVFATQDYTPGSANVGYIACAGYNQDPVKFISRAGVPGIGASFFALGC
5323200210230112123221220010012000233221220322020120022121232121100011221321000000112201020110000000001022224210010000023300100001222211121010000001210020102122212100000000
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.476 to 1lqmH
SCOP code=d.17.5.1		 TM-score=0.408 to 1oohA
SCOP code=a.39.2.1		 TM-score=0.415 to 1jjuA
SCOP code=a.3.1.7		 TM-score=0.483 to 1jmxA
SCOP code=a.3.1.7		 TM-score=0.442 to 1jjxA
SCOP code=b.60.1.2
Estimated TM-score of Model 1: 0.3187 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3547 ±0.0778