QUARK Ab Initio Results for YDAU_ECOLI


  Submitted Primary Sequence

>Length 285
MLFVLILSHRAASYGAIMAALPYMQLYIADYLADTMHLSAEEHGAYLLLMFNYWQTGKPIPKNRLAKIARLTNERWADVEPSLQEFFCDNGEEWVHLRIEEDLASVREKLTKKSAAGKASVQARRSRKEADVQTKQERNLTGVQTDVEVVFEHDVNTKATNKDTDKDLKTDPPLNPPRGNRGVKKFDPLDITLPNWISVSLWREWVEFRQALRKPIRTEQGANGAIRELEKFRQQGFSPEQVIRHSIANEYQGLFAPKGVRPETLLRQVNTVSLPDSAIPPGFRG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MLFVLILSHRAASYGAIMAALPYMQLYIADYLADTMHLSAEEHGAYLLLMFNYWQTGKPIPKNRLAKIARLTNERWADVEPSLQEFFCDNGEEWVHLRIEEDLASVREKLTKKSAAGKASVQARRSRKEADVQTKQERNLTGVQTDVEVVFEHDVNTKATNKDTDKDLKTDPPLNPPRGNRGVKKFDPLDITLPNWISVSLWREWVEFRQALRKPIRTEQGANGAIRELEKFRQQGFSPEQVIRHSIANEYQGLFAPKGVRPETLLRQVNTVSLPDSAIPPGFRG
CEEEEEEHHHHHHHHHHHHCCTTTTTTTHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHTTTTTTTTEEHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHTTTTTTTTCCTTTTTTCTTTTCCCTTTTTTTCCCCCCCTTTTTTTTTTTCCCTTTTTTTTTTTTTTTTTTTCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCTTTTHHHHHHHHHTTTTTTTTCCCCTTTTTTTTTCEEECTTTTCTTTTTC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MLFVLILSHRAASYGAIMAALPYMQLYIADYLADTMHLSAEEHGAYLLLMFNYWQTGKPIPKNRLAKIARLTNERWADVEPSLQEFFCDNGEEWVHLRIEEDLASVREKLTKKSAAGKASVQARRSRKEADVQTKQERNLTGVQTDVEVVFEHDVNTKATNKDTDKDLKTDPPLNPPRGNRGVKKFDPLDITLPNWISVSLWREWVEFRQALRKPIRTEQGANGAIRELEKFRQQGFSPEQVIRHSIANEYQGLFAPKGVRPETLLRQVNTVSLPDSAIPPGFRG
300100000200100001120010200000001201301021000000000000322321233101300302331021012002200112332001220121012033322322211322232332343232323334322223231322133323232233323332323232223423422332222313113101220021002003224331423200100021023034221102200120011302000223224233223322211123221132244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.508 to 1gk7A
SCOP code=h.1.20.1
TM-score=0.461 to 2hguK
SCOP code=d.99.1.1
TM-score=0.500 to 1kd9A
SCOP code=h.1.3.1
TM-score=0.484 to 1gk7A
SCOP code=h.1.20.1
TM-score=0.481 to 2r2vA
SCOP code=h.1.3.1
Estimated TM-score of Model 1: 0.3403 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3778 ±0.0778