QUARK Ab Initio Results for YCFJ_ECOLI


  Submitted Primary Sequence

>Length 179
MNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIKETVKTPRQECRNVTVTHRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGALGGGYAGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRDPGTQIPLDSNGQLILNNKV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
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  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIKETVKTPRQECRNVTVTHRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGALGGGYAGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRDPGTQIPLDSNGQLILNNKV
CCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCTTTTETTTTTEEEEETTTTEEEEEEEEEEEECCTTTTTTCEEEEEEEHHHHHHHHHTTTTTTTTHHHHHHHHHCCHCCCCCCCCCCCCCCEEEEEEEEEETTTTEEEEEEEEEEETTTTTEEEEEETTTTTTEEEETTTTCEEECCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIKETVKTPRQECRNVTVTHRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGALGGGYAGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRDPGTQIPLDSNGQLILNNKV
54211110000000000000000112213311210200212102111322233022010222222323341000000000000001212224121001000000001002213222333322211111021223313101001010203322020212422122010123111213344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.410 to 1p9wA
SCOP code=c.37.1.11		 TM-score=0.434 to 1q78A
SCOP code=a.160.1.1		 TM-score=0.412 to 1ka4A
SCOP code=d.92.1.5		 TM-score=0.445 to 2p0tA
SCOP code=a.290.1.1		 TM-score=0.466 to 2r2vA
SCOP code=h.1.3.1
Estimated TM-score of Model 1: 0.3175 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3534 ±0.0778