QUARK Ab Initio Results for YBJO_ECOLI

Submitted Primary Sequence

>Length 162
MEDETLGFFKKTSSSHARLNVPALVQVAALAIIMIRGLDVLMIFNTLGVRGIGEFIHRSVQTWSLTLVFLSSLVLVFIEIWCAFSLVKGRRWARWLYLLTQITAASYLWAASLGYGYPELFSIPGESKREIFHSLMLQKLPDMLILMLLFVPSTSRRFFQLQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MEDETLGFFKKTSSSHARLNVPALVQVAALAIIMIRGLDVLMIFNTLGVRGIGEFIHRSVQTWSLTLVFLSSLVLVFIEIWCAFSLVKGRRWARWLYLLTQITAASYLWAASLGYGYPELFSIPGESKREIFHSLMLQKLPDMLILMLLFVPSTSRRFFQLQ
CCHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTTHHHHHHHHHHHHHHHHHHHTTTTTCCEEETTTTTTHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MEDETLGFFKKTSSSHARLNVPALVQVAALAIIMIRGLDVLMIFNTLGVRGIGEFIHRSVQTWSLTLVFLSSLVLVFIEIWCAFSLVKGRRWARWLYLLTQITAASYLWAASLGYGYPELFSIPGESKREIFHSLMLQKLPDMLILMLLFVPSTSRRFFQLQ
553321111220011114120100010000000001000000001200030002002300110110000000000000100000000202310100100000000000000111201020000213232200100012301200000000012213211323
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.556 to 1n4mA SCOP code=a.74.1.3	TM-score=0.494 to 2f6lA SCOP code=a.130.1.4	TM-score=0.574 to 1lvfA SCOP code=a.47.2.1	TM-score=0.612 to 1s35A SCOP code=a.7.1.1	TM-score=0.558 to 1s35A SCOP code=a.7.1.1

Estimated TM-score of Model 1: 0.3867 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4274 ±0.0778