QUARK Ab Initio Results for YBFP_ECOLI


  Submitted Primary Sequence

>Length 164
MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTRGLTGSIAVNIAPFRCKTNCRGDNLPDNTRRWQLSGGNEKELTYLHNMSAQEKVGLNPGWQCYTSFFMRVCQGKPGTRPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKAINTH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTRGLTGSIAVNIAPFRCKTNCRGDNLPDNTRRWQLSGGNEKELTYLHNMSAQEKVGLNPGWQCYTSFFMRVCQGKPGTRPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKAINTH
CTTTTEEEEEEHHHHHHHHHHHHCTTTTTTTTTTTTECTTTTTTTTCCEEEEEECHHHTTTTTTTTTTTTTTCEEETTTTTTHHHHHHHCCCHHHHCCCTTTTEHHHHHHHHHHCCTTTTCCCCTTTTTTTTTTTTCEEEEEEEETTTTCHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTRGLTGSIAVNIAPFRCKTNCRGDNLPDNTRRWQLSGGNEKELTYLHNMSAQEKVGLNPGWQCYTSFFMRVCQGKPGTRPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKAINTH
55442111000000001000110122332212010000133323112010001001220333041330232221010222213101102212232212123111000100020022231222112231112211100000000010240223203311332335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.394 to 1tndA
SCOP code=a.66.1.1		 TM-score=0.386 to 2faeA
SCOP code=a.28.1.1		 TM-score=0.424 to 1s29A
SCOP code=a.4.5.46		 TM-score=0.415 to 2p62A
SCOP code=e.67.1.1		 TM-score=0.389 to 2jf2A
SCOP code=b.81.1.1
Estimated TM-score of Model 1: 0.2674 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.2998 ±0.0778