QUARK Ab Initio Results for YBFD_ECOLI

Submitted Primary Sequence

>Length 253
MELKKLMEHISIIPDYRQAWKVEHKLSDILLLTICAVISGAEGWEDIEDFGETHPDFLKQYGDFENGIPVHDTIARVVSCICPAKFHESFINWMLDYHSSDDKDVIAIDGKIHRHSYDKSRRKGAIHVISAFSTMHSLVIGQIKTDKKSNEITAIPELLNMLDIKGKIIKTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKAFEEKFPLKELNNPKHDSYAISEKSHGREETRLHIVCDVPDELIDFTFE
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MELKKLMEHISIIPDYRQAWKVEHKLSDILLLTICAVISGAEGWEDIEDFGETHPDFLKQYGDFENGIPVHDTIARVVSCICPAKFHESFINWMLDYHSSDDKDVIAIDGKIHRHSYDKSRRKGAIHVISAFSTMHSLVIGQIKTDKKSNEITAIPELLNMLDIKGKIIKTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKAFEEKFPLKELNNPKHDSYAISEKSHGREETRLHIVCDVPDELIDFTFE
CCHHHHHHHHHCCCCTTTTTTCCTTTTHHHHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHTTTTTTCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCTTTTCEEEEETTTTTTTTTTTTTTTTTTTEEEETTTTTCEEEEEETTTTTCHHHHHHHHHHHHTTTTTEEEETTTTTTHHHHHHHHHCCCCEEEETTTTTHHHHHHHHHHCCHHHCCCCCCCEEETTTTTTTCEEEEEEEEECCCHHHHCTTTT
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MELKKLMEHISIIPDYRQAWKVEHKLSDILLLTICAVISGAEGWEDIEDFGETHPDFLKQYGDFENGIPVHDTIARVVSCICPAKFHESFINWMLDYHSSDDKDVIAIDGKIHRHSYDKSRRKGAIHVISAFSTMHSLVIGQIKTDKKSNEITAIPELLNMLDIKGKIIKTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKAFEEKFPLKELNNPKHDSYAISEKSHGREETRLHIVCDVPDELIDFTFE
5513301210220312332231202001000000000002031031011002101200131021321012110001001201221022001100211111232100001031233123324431200000000122100000021344221110002002212031100101020023200220132201000002212230030013202233233332210121343311211110000212321231224
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.423 to 1nh2D SCOP code=a.32.1.1	TM-score=0.395 to 2b30A SCOP code=c.108.1.10	TM-score=0.419 to 1juoA SCOP code=a.39.1.8	TM-score=0.408 to 1of9A SCOP code=a.64.1.4	TM-score=0.392 to 2i7pB SCOP code=c.55.1.14

Estimated TM-score of Model 1: 0.3383 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3756 ±0.0778