QUARK Ab Initio Results for YBFC_ECOLI

Submitted Primary Sequence

>Length 189
MKRVLFFLLMIFVSFGVIADCEIQAKDHDCFTIFAKGTIFSAFPVLNNKAMWRWYQNEDIGEYYWQTELGTCKNNKFTPSGARLLIRVGSLRLNENHAIKGTLQELINTAEKTAFLGDRFRSYIRAGIYQKKSSDPVQLLAVLDNSIMVKYFKDEKPTYARMTAHLPNKNESYECLIKIQHELIRSEEK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKRVLFFLLMIFVSFGVIADCEIQAKDHDCFTIFAKGTIFSAFPVLNNKAMWRWYQNEDIGEYYWQTELGTCKNNKFTPSGARLLIRVGSLRLNENHAIKGTLQELINTAEKTAFLGDRFRSYIRAGIYQKKSSDPVQLLAVLDNSIMVKYFKDEKPTYARMTAHLPNKNESYECLIKIQHELIRSEEK
CHHHHHHHHHHHHHCCCEEEEECCCCCTTTTEEETTTTETTTTTTTCCHHHHHHHHCCCHHHHHHHHHHCCCCCTTTTTTTTEEEEETTTTETTTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTTTTHHHHHHTTTTHHHHHHHTTTTHHHHHHHHCCCCCCHHHHHHHHHHHHHTTTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKRVLFFLLMIFVSFGVIADCEIQAKDHDCFTIFAKGTIFSAFPVLNNKAMWRWYQNEDIGEYYWQTELGTCKNNKFTPSGARLLIRVGSLRLNENHAIKGTLQELINTAEKTAFLGDRFRSYIRAGIYQKKSSDPVQLLAVLDNSIMVKYFKDEKPTYARMTAHLPNKNESYECLIKIQHELIRSEEK
442001000100020100010212143320000002110111020011210020022230010001121120322310231020001001020232321301022002101211101210111022101223222112000001121002103323220010123023333112001101231232334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.462 to 1kd9A SCOP code=h.1.3.1	TM-score=0.468 to 1kd9A SCOP code=h.1.3.1	TM-score=0.492 to 2r2vA SCOP code=h.1.3.1	TM-score=0.416 to 1grjA SCOP code=a.2.1.1	TM-score=0.439 to 1u6gC SCOP code=a.118.1.2

Estimated TM-score of Model 1: 0.2979 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3325 ±0.0778