QUARK Ab Initio Results for YBAY_ECOLI

Submitted Primary Sequence

>Length 190
MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPAIQQPNVSGTVWIRQKVALPPDAVLTVTLSDASLADAPSKVLAQKAVRTEGKQSPFSFVLSFNPADVQPNARILLSAAITVNDKLVFITDTVQPVINQGGTKADLTLVPVQQTAVPVQASGGATTTVPSTSPTQVNPSSAVPAPTQY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPAIQQPNVSGTVWIRQKVALPPDAVLTVTLSDASLADAPSKVLAQKAVRTEGKQSPFSFVLSFNPADVQPNARILLSAAITVNDKLVFITDTVQPVINQGGTKADLTLVPVQQTAVPVQASGGATTTVPSTSPTQVNPSSAVPAPTQY
CCHHHHHHHHHHHHHHHHHCTTTTCCCCCTTTTCCCCCCTTTTCTTTTEEEEEEEETTTTTTTTTTEEEEEEEECCTTTTCCCEEEEEEETTTTTCCCEEEEEECCHHHCTTTTEEEEEEEETTTTTEEEEECCCEEEETTTTTEEEEEEEECCCCCCCCCTTTTETTTTCCCCCCCCTTTTCCCTTTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types
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Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPAIQQPNVSGTVWIRQKVALPPDAVLTVTLSDASLADAPSKVLAQKAVRTEGKQSPFSFVLSFNPADVQPNARILLSAAITVNDKLVFITDTVQPVINQGGTKADLTLVPVQQTAVPVQASGGATTTVPSTSPTQVNPSSAVPAPTQY
4311110000000000010223213232212122221112333223321020101012312013202010000101223132211011102142440101000101122023301000000021232000002211111232322010001103322131312101012121222222322222213334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.407 to 1ly7A SCOP code=d.82.2.1	TM-score=0.402 to 1tndA SCOP code=a.66.1.1	TM-score=0.457 to 1xszA SCOP code=a.118.3.1	TM-score=0.409 to 1fsaA SCOP code=e.7.1.1	TM-score=0.376 to 2o38A SCOP code=a.35.1.13

Estimated TM-score of Model 1: 0.3110 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3464 ±0.0778