QUARK Ab Initio Results for WCAD_ECOLI

Submitted Primary Sequence

>Length 405
MSTSIRICSYLLLPLIYLLVNVKIAQLGESFPITIVTFLPVLLLLFLERISVKKLMIALGIGAGLTAFNYLFGQSLDASKYVTSTMLFVYIVIIIGMVWSIRFKTISPHNHRKILRFFYLVVGLVVALAAVEMAQIILTGGSSIMESISKYLIYSNSYVLNFIKFGGKRTTALYFEPAFFALALISIWLSIKQFGIKTPKTDAMILAGIILSGSFSGVMTFILFYLLEWAFQYLNKEAIKKKLPLALISLAVFLVGVVIAFPYISTRLGDLGTEGSSSYYRIVGPLVMVGYSLTHIDGVVRFGSLYEYVASFGIFNGADVGKTIDNGLYLLIIYFSWFAVFLSLWYMGKVIKMMINAFGDNRNFRVQLYLFTPVSLFFTGSIFSPEYAFLIVCPFILRKALNITR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MSTSIRICSYLLLPLIYLLVNVKIAQLGESFPITIVTFLPVLLLLFLERISVKKLMIALGIGAGLTAFNYLFGQSLDASKYVTSTMLFVYIVIIIGMVWSIRFKTISPHNHRKILRFFYLVVGLVVALAAVEMAQIILTGGSSIMESISKYLIYSNSYVLNFIKFGGKRTTALYFEPAFFALALISIWLSIKQFGIKTPKTDAMILAGIILSGSFSGVMTFILFYLLEWAFQYLNKEAIKKKLPLALISLAVFLVGVVIAFPYISTRLGDLGTEGSSSYYRIVGPLVMVGYSLTHIDGVVRFGSLYEYVASFGIFNGADVGKTIDNGLYLLIIYFSWFAVFLSLWYMGKVIKMMINAFGDNRNFRVQLYLFTPVSLFFTGSIFSPEYAFLIVCPFILRKALNITR
CCCCHHHHHHHHHHHHHHHHHHHHHHHTTTTCEEEHHHHHHHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHCCCCTTTTTTCCCHHHHHHHHTTTTHHHEEEETTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHTTTTTTHEEEEETTTTTEEEEEEECHHHHHHHHHHHHHHHHHHTTTTTTTTHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHTTTTTTTTHHHHHCCCCCCCCCTTTTETTTTEEEEEEEEETTTTTEETTTTHHHHHHHCCCCTTTTCCCTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTEEEEEETTTTHHHTTTTTTTTTHHEEEECHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

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Download Predicted Starting Beta-turn Position

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSTSIRICSYLLLPLIYLLVNVKIAQLGESFPITIVTFLPVLLLLFLERISVKKLMIALGIGAGLTAFNYLFGQSLDASKYVTSTMLFVYIVIIIGMVWSIRFKTISPHNHRKILRFFYLVVGLVVALAAVEMAQIILTGGSSIMESISKYLIYSNSYVLNFIKFGGKRTTALYFEPAFFALALISIWLSIKQFGIKTPKTDAMILAGIILSGSFSGVMTFILFYLLEWAFQYLNKEAIKKKLPLALISLAVFLVGVVIAFPYISTRLGDLGTEGSSSYYRIVGPLVMVGYSLTHIDGVVRFGSLYEYVASFGIFNGADVGKTIDNGLYLLIIYFSWFAVFLSLWYMGKVIKMMINAFGDNRNFRVQLYLFTPVSLFFTGSIFSPEYAFLIVCPFILRKALNITR
553213001100000010001010131142110000100000000012101011000000000001000000022132232122211101001211112001011022221220020000000000000001002001210220021014000101200000020113200000010000000000000102412031242212000001222212110000000002000210123003431211100000121112221220013013112312221010001000000000102100100101100000001100211311310111000100100001001100200100011012222020100000101100102111111000000100023113234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.419 to 2r2vA SCOP code=h.1.3.1	TM-score=0.424 to 1ho8A SCOP code=a.118.1.9	TM-score=0.419 to 2r2vA SCOP code=h.1.3.1	TM-score=0.428 to 1et1A SCOP code=j.15.1.1	TM-score=0.445 to 2r2vA SCOP code=h.1.3.1

Estimated TM-score of Model 1: 0.3297 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3665 ±0.0778