QUARK Ab Initio Results for SSEB_ECOLI

Submitted Primary Sequence

>Length 258
MSETKNELEDLLEKAATEPAHRPAFFRTLLESTVWVPGTAAQGEAVVEDSALDLQHWEKEDGTSVIPFFTSLEALQQAVEDEQAFVVMPVRTLFEMTLGETLFLNAKLPTGKEFMPREISLLIGEEGNPLSSQEILEGGESLILSEVAEPPAQMIDSLTTLFKTIKPVKRAFICSIKENEEAQPNLLIGIEADGDIEEIIQATGSVATDTLPGDEPIDICQVKKGEKGISHFITEHIAPFYERRWGGFLRDFKQNRII
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MSETKNELEDLLEKAATEPAHRPAFFRTLLESTVWVPGTAAQGEAVVEDSALDLQHWEKEDGTSVIPFFTSLEALQQAVEDEQAFVVMPVRTLFEMTLGETLFLNAKLPTGKEFMPREISLLIGEEGNPLSSQEILEGGESLILSEVAEPPAQMIDSLTTLFKTIKPVKRAFICSIKENEEAQPNLLIGIEADGDIEEIIQATGSVATDTLPGDEPIDICQVKKGEKGISHFITEHIAPFYERRWGGFLRDFKQNRII
CCCCHHHHHHHHHHTTTTHHHHHHHHHHHHHCCEEEEECTTTTTTTTTTTCEEEEEEETTTTCEEEEEECCHHHHHHHHTTTTTEEEEEHHHHHHCTTTTCETTTTTTTTTCECCHHHHHHHHHTTTTCCCCCEETTTTTEEEECCTTTTTTHHHHHHHHHHHHTTTTHHHHHHHHHTTTTTTCEEEEEEETTTTHHHHHHHHHHHHHHHCTTTTEEEEEEECTTTTCHHHHHHHCCCTTTTCCHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

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Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSETKNELEDLLEKAATEPAHRPAFFRTLLESTVWVPGTAAQGEAVVEDSALDLQHWEKEDGTSVIPFFTSLEALQQAVEDEQAFVVMPVRTLFEMTLGETLFLNAKLPTGKEFMPREISLLIGEEGNPLSSQEILEGGESLILSEVAEPPAQMIDSLTTLFKTIKPVKRAFICSIKENEEAQPNLLIGIEADGDIEEIIQATGSVATDTLPGDEPIDICQVKKGEKGISHFITEHIAPFYERRWGGFLRDFKQNRII
553233301300231122221111003101401000002223332223322010100234322100000111300220043331001010110130121310000030310120123001101233122222221132221011021231123003001200441220110000003233423200000010222132002100200141133321000000242242002001321210112301000210333324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.364 to 2avyS SCOP code=d.28.1.1	TM-score=0.389 to 1xnfB SCOP code=a.118.8.1	TM-score=0.395 to 1vqrA SCOP code=a.211.1.3	TM-score=0.363 to 2bfrA SCOP code=c.50.1.2	TM-score=0.400 to 1ys6B SCOP code=a.4.6.1

Estimated TM-score of Model 1: 0.3175 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3534 ±0.0778