QUARK Ab Initio Results for RFC_ECOLI

Submitted Primary Sequence

>Length 388
MIYLVISVFLITAFICLYLKKDIFYPAVCVNIIFALVLLGYEITSDIYAFQLNDATLIFLLCNVLTFTLSCLLTESVLDLNIRKVNNAIYSIPSKKVHNVGLLVISFSMIYICMRLSNYQFGTSLLSYMNLIRDADVEDTSRNFSAYMQPIILTTFALFIWSKKFTNTKVSKTFTLLVFIVFIFAIILNTGKQIVFMVIISYAFIVGVNRVKHYVYLITAVGVLFSLYMLFLRGLPGGMAYYLSMYLVSPIIAFQEFYFQQVSNSASSHVFWFFERLMGLLTGGVSMSLHKEFVWVGLPTNVYTAFSDYVYISAELSYLMMVIHGCISGVLWRLSRNYISVKIFYSYFIYTFSFIFYHESFMTNISSWIQITLCIIVFSQFLKAQKIK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MIYLVISVFLITAFICLYLKKDIFYPAVCVNIIFALVLLGYEITSDIYAFQLNDATLIFLLCNVLTFTLSCLLTESVLDLNIRKVNNAIYSIPSKKVHNVGLLVISFSMIYICMRLSNYQFGTSLLSYMNLIRDADVEDTSRNFSAYMQPIILTTFALFIWSKKFTNTKVSKTFTLLVFIVFIFAIILNTGKQIVFMVIISYAFIVGVNRVKHYVYLITAVGVLFSLYMLFLRGLPGGMAYYLSMYLVSPIIAFQEFYFQQVSNSASSHVFWFFERLMGLLTGGVSMSLHKEFVWVGLPTNVYTAFSDYVYISAELSYLMMVIHGCISGVLWRLSRNYISVKIFYSYFIYTFSFIFYHESFMTNISSWIQITLCIIVFSQFLKAQKIK
CEEEEEEHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHHCCEETTTTTEEETTTTTEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHTTTTTEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHCTTTTHHHCCHHHHHCCHHHHHHHHHHHHHHCCCCEEHHEHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEETTTTHHEEEEEHHHHHHHHHHHHHHTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHCTTTTTHHHHHHHHHHHHHHCCEEEEEEEEEEEETTTTHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

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Download Predicted Starting Beta-turn Position

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIYLVISVFLITAFICLYLKKDIFYPAVCVNIIFALVLLGYEITSDIYAFQLNDATLIFLLCNVLTFTLSCLLTESVLDLNIRKVNNAIYSIPSKKVHNVGLLVISFSMIYICMRLSNYQFGTSLLSYMNLIRDADVEDTSRNFSAYMQPIILTTFALFIWSKKFTNTKVSKTFTLLVFIVFIFAIILNTGKQIVFMVIISYAFIVGVNRVKHYVYLITAVGVLFSLYMLFLRGLPGGMAYYLSMYLVSPIIAFQEFYFQQVSNSASSHVFWFFERLMGLLTGGVSMSLHKEFVWVGLPTNVYTAFSDYVYISAELSYLMMVIHGCISGVLWRLSRNYISVKIFYSYFIYTFSFIFYHESFMTNISSWIQITLCIIVFSQFLKAQKIK
2000000000000000000121001000000000000000010111000010220000000000000000000020001010230220001001330120000000000000001012121010000001002102032012102011110000000000002302212011000000000000000021121000000000000000130100000000000000000000210110000000000000000012000220132110100000010000010000000011000010111000001100000010000000010000000020122000010000000000000000200001000001000000001201323424
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

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Predicted Tertiary Structure


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TM-score=0.393 to 1et1A SCOP code=j.15.1.1	TM-score=0.430 to 2e2aA SCOP code=a.7.2.1	TM-score=0.444 to 1kd9A SCOP code=h.1.3.1	TM-score=0.469 to 1kd9A SCOP code=h.1.3.1	TM-score=0.471 to 1usdA SCOP code=h.1.29.1

Estimated TM-score of Model 1: 0.3097 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3450 ±0.0778