QUARK Ab Initio Results for HTRL_ECOLI

Submitted Primary Sequence

>Length 285
MKSSTTIITAYFDIGRGDWTANKGFREKLARSVDVYFSYFERLAALENEMIIFTSPDLKPRVEAIRNGKPTTVIVIDIKKKFRYIRSRIEKIQKDESFTNRLEPRQLKNPEYWSPEYVLVCNLKAYFVNKAINMGLVKTPLVAWIDFGYCHKPNVTRGLKIWDFPFDESKMHLFTIKKGLTVTSQQQVFDFMIGNHVYIIGGAIVGSQHKWKEFYKLVLESQKITLNNNIVDDDQGIFVMCYYKRPDLFNLNYLGRGKWFDLFRCFRSNTLGAKMQALRIFLSRK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKSSTTIITAYFDIGRGDWTANKGFREKLARSVDVYFSYFERLAALENEMIIFTSPDLKPRVEAIRNGKPTTVIVIDIKKKFRYIRSRIEKIQKDESFTNRLEPRQLKNPEYWSPEYVLVCNLKAYFVNKAINMGLVKTPLVAWIDFGYCHKPNVTRGLKIWDFPFDESKMHLFTIKKGLTVTSQQQVFDFMIGNHVYIIGGAIVGSQHKWKEFYKLVLESQKITLNNNIVDDDQGIFVMCYYKRPDLFNLNYLGRGKWFDLFRCFRSNTLGAKMQALRIFLSRK
CCCEEEEEEEEEETTTTTTTTTTTTTTTTTTTHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHTTTTCCEEETTTTTTHHHHHHHHHHHHHHHHHHHHHCCHHHTTTTTTTCCEEEEEEHHHHHHHHHHHHCCCCCTTTTEEEETTTTTTTCCTTTTTTTTCCCTTTTEEEEEETTTTTCCCHHHHHHHHHCCEEETTTTTEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCTTTTEEETTTTTTHHHHHHHCTTTTHHHHHHHHHHETTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKSSTTIITAYFDIGRGDWTANKGFREKLARSVDVYFSYFERLAALENEMIIFTSPDLKPRVEAIRNGKPTTVIVIDIKKKFRYIRSRIEKIQKDESFTNRLEPRQLKNPEYWSPEYVLVCNLKAYFVNKAINMGLVKTPLVAWIDFGYCHKPNVTRGLKIWDFPFDESKMHLFTIKKGLTVTSQQQVFDFMIGNHVYIIGGAIVGSQHKWKEFYKLVLESQKITLNNNIVDDDQGIFVMCYYKRPDLFNLNYLGRGKWFDLFRCFRSNTLGAKMQALRIFLSRK
563101000000001212122342233412220210020021002021100000123013201213523321000021232031012102301312101230123213213121010000000100000100221103120000000000132200302321101033110000102422222212100100110100000000001221032003001200200030200221000000002321300100001302001002003231100122014000254
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.410 to 2np5A SCOP code=a.4.1.9	TM-score=0.420 to 1keyB SCOP code=a.118.16.1	TM-score=0.398 to 1qcfA SCOP code=b.34.2.1	TM-score=0.376 to 1paqA SCOP code=a.118.1.14	TM-score=0.415 to 1h0nA SCOP code=a.25.1.2

Estimated TM-score of Model 1: 0.3185 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3544 ±0.0778