QUARK Ab Initio Results for HTRC_ECOLI


  Submitted Primary Sequence

>Length 179
MKQEVEKWRPFGHPDGDIRDLSFLDAHQAVYVQHHEGKEPLEYRFWVTYSLHCFTKDYEHQTNEEKQSLMYHAPKESRPFCQHRYNLARTHLKRTILALPESNVIHAGYGSYAVIEVDLDGGDKAFYFVAFRAFREKKKLRLHVTSAYPISEKQKGKSVKFFTIAYNLLRNKQLPQPSK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKQEVEKWRPFGHPDGDIRDLSFLDAHQAVYVQHHEGKEPLEYRFWVTYSLHCFTKDYEHQTNEEKQSLMYHAPKESRPFCQHRYNLARTHLKRTILALPESNVIHAGYGSYAVIEVDLDGGDKAFYFVAFRAFREKKKLRLHVTSAYPISEKQKGKSVKFFTIAYNLLRNKQLPQPSK
CHHHHHHCCCCCTTTTCEEEECCCTTTTEEEEECTTTTTTTEEEEEEEETTTTETTTTTTTTTTTTTTEEEETTTTCCCCCHHHHHHHHHHHHHHHHHHHHCCEEETTTTCEEEEEETTTTTTCCCEEEEEEETTTTTEEEEEEEECCCTTTTTTTTCEEHHHHHHHHTTTTCCCTTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKQEVEKWRPFGHPDGDIRDLSFLDAHQAVYVQHHEGKEPLEYRFWVTYSLHCFTKDYEHQTNEEKQSLMYHAPKESRPFCQHRYNLARTHLKRTILALPESNVIHAGYGSYAVIEVDLDGGDKAFYFVAFRAFREKKKLRLHVTSAYPISEKQKGKSVKFFTIAYNLLRNKQLPQPSK
55332332231221301100011022110101223434431202000100000002223333333431000113331100022001001210230021013120011221100001012422342200000202234320100010012233333232020000011103433233334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.455 to 2gexA
SCOP code=d.17.4.9		 TM-score=0.408 to 2bb8A
SCOP code=d.10.1.1		 TM-score=0.394 to 1n8jT
SCOP code=c.47.1.10		 TM-score=0.458 to 1xs0C
SCOP code=d.233.1.1		 TM-score=0.422 to 1z94B
SCOP code=d.129.3.5
Estimated TM-score of Model 1: 0.2920 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3261 ±0.0778