QUARK Ab Initio Results for HTGA_ECOLI

Submitted Primary Sequence

>Length 196
MTALTPFSAAPTGPPSPAPRSKPCPSTLIAAWVRKMRVSWLESKCDTPFANNLSFISSGSSSSSSFTLASTACRNSCLCSSSIFFQVLRRNCSSNCCSISNVDISLSAFSFNRFETSSKMARYNLPCPRSLLAILSPPKCCNSPAISCQLRRCCSGCPSIDLNSSLRISTLERRVLPFSLWVSNRAKFANCSSLQC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MTALTPFSAAPTGPPSPAPRSKPCPSTLIAAWVRKMRVSWLESKCDTPFANNLSFISSGSSSSSSFTLASTACRNSCLCSSSIFFQVLRRNCSSNCCSISNVDISLSAFSFNRFETSSKMARYNLPCPRSLLAILSPPKCCNSPAISCQLRRCCSGCPSIDLNSSLRISTLERRVLPFSLWVSNRAKFANCSSLQC
CTTTTTTTCCCTTTTCCCCCTTTTCHHHHHHHHHHHHHHHHHTTTTTTTTTTTEEEETTTTTTTTHHHHHHHTTTTTTTCHHHHHHHHHHHCCTTTTTTTTTEEEEEEEETTTTHHHHHHHTTTTTTCHHHHHHHTTTTTTTTTTHHHHHHHHHCCCCCCTTTTCHHHHHHHHHCCCEEEETTTTHHTTTTTTTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTALTPFSAAPTGPPSPAPRSKPCPSTLIAAWVRKMRVSWLESKCDTPFANNLSFISSGSSSSSSFTLASTACRNSCLCSSSIFFQVLRRNCSSNCCSISNVDISLSAFSFNRFETSSKMARYNLPCPRSLLAILSPPKCCNSPAISCQLRRCCSGCPSIDLNSSLRISTLERRVLPFSLWVSNRAKFANCSSLQC
5542122221221222212423202220010002201120022303121222010012122222201001110332110212000200232032300202201000000001212111101312020121001101224113231110102300230221313221201101231021000001112122122231
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.418 to 2fl4A SCOP code=d.108.1.1	TM-score=0.404 to 1wp9A SCOP code=c.37.1.19	TM-score=0.410 to 2a5yB SCOP code=a.4.5.80	TM-score=0.410 to 1ygoA SCOP code=a.77.1.2	TM-score=0.415 to 1shzA SCOP code=a.66.1.1

Estimated TM-score of Model 1: 0.2750 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3079 ±0.0778