QUARK Ab Initio Results for DIND_ECOLI

Submitted Primary Sequence

>Length 274
MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK
CTTTTCCHHHHCCCTTTTCEEECHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEECTTTTTTTCCHHEEEHHHHHHHHHTTTTTTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTTTTTEEECCCHHHHHHCCCCHHHHHHHHCTTTTTCHHHHCCCHHHHHHHHHHHHHHHHHHTTTTTTTHHHHHHHHHHHHHHHHHHHHHTTTTTTTTCCCHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK
5553332133033122311100002100300112102201300120120043132202210220010021132142213200000000000123132222101001200222122320122211221322131122232133113300300241112222100002120010011012220013333034323001101102000210111112221443213123201211120023013102321222143032232103303322332345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.543 to 1t2kD SCOP code=h.1.3.1	TM-score=0.514 to 1l2pA SCOP code=f.23.21.1	TM-score=0.544 to 1debA SCOP code=h.1.18.1	TM-score=0.553 to 2tmaA SCOP code=h.1.5.1	TM-score=0.544 to 1t3jA SCOP code=h.4.16.1

Estimated TM-score of Model 1: 0.3902 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4312 ±0.0778