QUARK Ab Initio Results for CBRC_ECOLI

Submitted Primary Sequence

>Length 195
MTQNIRPLPQFKYHPKPLETGAFEQDKTVECDCCEQQTSVYYSGPFYCVDEVEHLCPWCIADGSAAEKFAGSFQDDASIEGVEFEYDEEDEFAGIKNTYPDEMLKELVERTPGYHGWQQEFWLAHCGDFCVFIGYVGWNDIKDRLDEFANLEEDCENFGIRNSDLAKCLQKGGHCQGYLFRCLHCGKLRLWGDFS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MTQNIRPLPQFKYHPKPLETGAFEQDKTVECDCCEQQTSVYYSGPFYCVDEVEHLCPWCIADGSAAEKFAGSFQDDASIEGVEFEYDEEDEFAGIKNTYPDEMLKELVERTPGYHGWQQEFWLAHCGDFCVFIGYVGWNDIKDRLDEFANLEEDCENFGIRNSDLAKCLQKGGHCQGYLFRCLHCGKLRLWGDFS
CCCCCCCTTTTTTTCCHHHCCCEEETTTTTTTTTTTEEEEETTTTEEETTTTTTCTTTTTTTTHHHHHCCCEEECTTTTTTTCCTTTTTTTTCCCCCCCCHHHHHHHHHHTTTTCTTTTCHHHHHCCCHHHHHTTTTHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHTTTTCEEEEEEETTTTTTEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTQNIRPLPQFKYHPKPLETGAFEQDKTVECDCCEQQTSVYYSGPFYCVDEVEHLCPWCIADGSAAEKFAGSFQDDASIEGVEFEYDEEDEFAGIKNTYPDEMLKELVERTPGYHGWQQEFWLAHCGDFCVFIGYVGWNDIKDRLDEFANLEEDCENFGIRNSDLAKCLQKGGHCQGYLFRCLHCGKLRLWGDFS
554324201303101200301001234212020132212010100000112031001100020200230202011202032131323333321114321233002100320111201121100000110010012001310231121012012103212231210030025223010000100201101010124
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.402 to 1y4oA SCOP code=d.110.7.1	TM-score=0.412 to 1n5uA SCOP code=a.126.1.1	TM-score=0.389 to 2fsuA SCOP code=c.67.2.1	TM-score=0.395 to 2h85A SCOP code=c.66.1.48	TM-score=0.401 to 1grnB SCOP code=a.116.1.1

Estimated TM-score of Model 1: 0.2744 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3073 ±0.0778