QUARK Ab Initio Results for YQIB_ECOLI


  Submitted Primary Sequence

>Length 140
MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQYRLTIVESTRYTTLVTIEQTAPAISYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQYRLTIVESTRYTTLVTIEQTAPAISYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVY
CTTTTCCHHHHHHHHHHHHHHHHHHCCCCTTTTTEEEEETTTTEEEEEEEEETTTTEEEEEEEECTTTTTTTCCCEEEEETTTTEEEEEETTTTTTTTTTTTTTTTTTTTTHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQYRLTIVESTRYTTLVTIEQTAPAISYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVY
55422120220020011000101300242323121000213202010100120410120101111322332110101000011010010001221221312131124422121111000100120020013212222334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.502 to 1hpwA
SCOP code=d.24.1.1		 TM-score=0.506 to 3ci0I
SCOP code=d.24.1.7		 TM-score=0.509 to 2arhA
SCOP code=d.108.1.9		 TM-score=0.456 to 1hpwA
SCOP code=d.24.1.1		 TM-score=0.494 to 3ci0I
SCOP code=d.24.1.7
Estimated TM-score of Model 1: 0.3523 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3906 ±0.0778