QUARK Ab Initio Results for YPFN_ECOLI

Submitted Primary Sequence

>Length 66
MDWLAKYWWILVIVFLVGVLLNVIKDLKRVDHKKFLANKPELPPHRDFNDKWDDDDDWPKKDQPKK
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--------10--------20--------30--------40--------50--------60

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MDWLAKYWWILVIVFLVGVLLNVIKDLKRVDHKKFLANKPELPPHRDFNDKWDDDDDWPKKDQPKK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHTTTTCCCCCCCTTTTTTCTTTTTTTTCCCCC
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--------10--------20--------30--------40--------50--------60

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDWLAKYWWILVIVFLVGVLLNVIKDLKRVDHKKFLANKPELPPHRDFNDKWDDDDDWPKKDQPKK
431112001000000000000200220330123201322230122211223122333124444348
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--------10--------20--------30--------40--------50--------60

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.630 to 1kd9A SCOP code=h.1.3.1	TM-score=0.613 to 1kd9A SCOP code=h.1.3.1	TM-score=0.606 to 2hguK SCOP code=d.99.1.1	TM-score=0.607 to 1y4mA SCOP code=h.3.2.1	TM-score=0.500 to 2dt6A SCOP code=a.217.1.1

Estimated TM-score of Model 1: 0.3731 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4129 ±0.0778