QUARK Ab Initio Results for YNJH_ECOLI

Submitted Primary Sequence

>Length 90
MSRALFAVVLAFPLIALANPHYRPDVEVNVPPEVFSSGGQSAQPCTQCCVYQDQNYSEGAVIKAEGILLQCQRDDKTLSTNPLVWRRVKP
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MSRALFAVVLAFPLIALANPHYRPDVEVNVPPEVFSSGGQSAQPCTQCCVYQDQNYSEGAVIKAEGILLQCQRDDKTLSTNPLVWRRVKP
CCHHHHHHHHHHHHHHHHHHCCTTTTTEECCHHHTTTTTTTTCCCEEEEEEETTTTTTTTEETTTTTEEEEECTTTTTTTTCCEEEEECC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSRALFAVVLAFPLIALANPHYRPDVEVNVPPEVFSSGGQSAQPCTQCCVYQDQNYSEGAVIKAEGILLQCQRDDKTLSTNPLVWRRVKP
432111110100000000232322202010012112222322320010000213211410002020000102223422223211012026
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.552 to 2h1tA SCOP code=b.178.1.1	TM-score=0.519 to 3ci0I SCOP code=d.24.1.7	TM-score=0.474 to 1pxvC SCOP code=b.61.2.2	TM-score=0.548 to 1ekmA SCOP code=b.30.2.1	TM-score=0.532 to 2h1tA SCOP code=b.178.1.1

Estimated TM-score of Model 1: 0.3571 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3958 ±0.0778