QUARK Ab Initio Results for YNEG_ECOLI

Submitted Primary Sequence

>Length 119
MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAADFVAKRLAPALPANDGKQTPMRGHPVFIAQHATATCCRGCLAKWHNIPQGVSLSEEQQRYIVAVIYHWLVVQMNQP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAADFVAKRLAPALPANDGKQTPMRGHPVFIAQHATATCCRGCLAKWHNIPQGVSLSEEQQRYIVAVIYHWLVVQMNQP
CHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCTTTTTTTCCTTTTCEEEECCHHHHHHHHHHHHHHCCTTTTCCCHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAADFVAKRLAPALPANDGKQTPMRGHPVFIAQHATATCCRGCLAKWHNIPQGVSLSEEQQRYIVAVIYHWLVVQMNQP
44202211220131212121302231121034210310130002000310022202222430124110000011000000200012014014222023311210000001002122324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.565 to 1b10A SCOP code=d.6.1.1	TM-score=0.523 to 1i2tA SCOP code=a.144.1.1	TM-score=0.444 to 1p0yB SCOP code=a.166.1.1	TM-score=0.520 to 1aj5A SCOP code=a.39.1.8	TM-score=0.497 to 1tlqA SCOP code=a.195.1.1

Estimated TM-score of Model 1: 0.3739 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4137 ±0.0778