QUARK Ab Initio Results for YNAE_ECOLI

Submitted Primary Sequence

>Length 77
MKSKDTLKWFPAQLPEVRIILGDAVVEVAKQGRPINTRTLLDYIEGNIKKTSWLDNKELLQTAISVLKDNQNLNGKM
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--------10--------20--------30--------40--------50--------60--------70

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKSKDTLKWFPAQLPEVRIILGDAVVEVAKQGRPINTRTLLDYIEGNIKKTSWLDNKELLQTAISVLKDNQNLNGKM
CCCCCCCCCTTTTTTCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCTTTTTT
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKSKDTLKWFPAQLPEVRIILGDAVVEVAKQGRPINTRTLLDYIEGNIKKTSWLDNKELLQTAISVLKDNQNLNGKM
55443223212130120100002000101422221123101200201133222132320021002003223323244
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.573 to 1u84A SCOP code=a.230.1.1	TM-score=0.535 to 1eo0A SCOP code=a.48.3.1	TM-score=0.582 to 1hlvA SCOP code=a.4.1.7	TM-score=0.556 to 2ff4A SCOP code=a.4.6.1	TM-score=0.551 to 2as5F SCOP code=a.4.5.14

Estimated TM-score of Model 1: 0.4409 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4854 ±0.0778