QUARK Ab Initio Results for YKIA_ECOLI

Submitted Primary Sequence

>Length 93
MLQSRNDHLRQTALRNAHTPALLLTTLTEPQDRSLAINNPQLAADVKTAWLKEDPSLLLFVEQPDLSLLRDLVKTGATRKIRSEARHRLEEKQ
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MLQSRNDHLRQTALRNAHTPALLLTTLTEPQDRSLAINNPQLAADVKTAWLKEDPSLLLFVEQPDLSLLRDLVKTGATRKIRSEARHRLEEKQ
CCCCHHHHHHHHHHHTTTTHHHHHHHHCCHHHHHHHHCTTTTTHHHHHHHHHTTTTHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHTTTT
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLQSRNDHLRQTALRNAHTPALLLTTLTEPQDRSLAINNPQLAADVKTAWLKEDPSLLLFVEQPDLSLLRDLVKTGATRKIRSEARHRLEEKQ
553222221321013233111100122012311110121220012011010332220002122131210220032112230122133323444
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.548 to 1kmhA SCOP code=a.69.1.1	TM-score=0.609 to 1vb5B SCOP code=c.124.1.5	TM-score=0.517 to 1zq1C SCOP code=a.182.1.2	TM-score=0.509 to 1i2tA SCOP code=a.144.1.1	TM-score=0.557 to 1eo0A SCOP code=a.48.3.1

Estimated TM-score of Model 1: 0.4356 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4797 ±0.0778