QUARK Ab Initio Results for YIJD_ECOLI


  Submitted Primary Sequence

>Length 119
MKQANQDRGTLLLALVAGLSINGTFAALFSSIVPFSVFPIISLVLTVYCLHQRYLNRTMPVGLPGLAAACFILGVLLYSTVVRAEYPDIGSNFFPAVLSVIMVFWIGAKMRNRKQEVAE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
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  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKQANQDRGTLLLALVAGLSINGTFAALFSSIVPFSVFPIISLVLTVYCLHQRYLNRTMPVGLPGLAAACFILGVLLYSTVVRAEYPDIGSNFFPAVLSVIMVFWIGAKMRNRKQEVAE
CCTTTTHHHHHHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHTTTTCCTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
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Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKQANQDRGTLLLALVAGLSINGTFAALFSSIVPFSVFPIISLVLTVYCLHQRYLNRTMPVGLPGLAAACFILGVLLYSTVVRAEYPDIGSNFFPAVLSVIMVFWIGAKMRNRKQEVAE
55423322010000000000010000001222120100000000000100022102221222000000000000000000002121231111000000000000000111333333225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
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  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.623 to 1fbvA
SCOP code=a.39.1.7		 TM-score=0.603 to 1w27A
SCOP code=a.127.1.2		 TM-score=0.649 to 1u6gC
SCOP code=a.118.1.2		 TM-score=0.775 to 2rldA
SCOP code=a.29.16.1		 TM-score=0.605 to 1fbvA
SCOP code=a.39.1.7
Estimated TM-score of Model 1: 0.4060 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4481 ±0.0778