QUARK Ab Initio Results for YIBV_ECOLI

Submitted Primary Sequence

>Length 111
MADKAILWALISASTKEGRKACSLSYFACKAAEAELGLAYMAANDNKEFLTSLSNIMRYKIDAGLSESYTCYLLSKGKIIRPYLKNLNPLQLAADCIETVNKIKDKNKKNH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MADKAILWALISASTKEGRKACSLSYFACKAAEAELGLAYMAANDNKEFLTSLSNIMRYKIDAGLSESYTCYLLSKGKIIRPYLKNLNPLQLAADCIETVNKIKDKNKKNH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTTTTTTTEEEETTTTTTHHHHTTTTCHHHHHHHHHHHHHHHHHHCTTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MADKAILWALISASTKEGRKACSLSYFACKAAEAELGLAYMAANDNKEFLTSLSNIMRYKIDAGLSESYTCYLLSKGKIIRPYLKNLNPLQLAADCIETVNKIKDKNKKNH
542311111101112331240011110001001110000101122233002101100211022212320000001202002210331111200110021023133333444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.535 to 2ff4A SCOP code=a.4.6.1	TM-score=0.563 to 1gntA SCOP code=e.26.1.1	TM-score=0.530 to 2fd5A SCOP code=a.4.1.9	TM-score=0.537 to 1vb5B SCOP code=c.124.1.5	TM-score=0.590 to 1j5wB SCOP code=d.104.1.1

Estimated TM-score of Model 1: 0.4069 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4491 ±0.0778