QUARK Ab Initio Results for YHHA_ECOLI


  Submitted Primary Sequence

>Length 146
MKRLLILTALLPFVGFAQPINTLNNPNQPGYQIPSQQRMQTQMQTQQIQQKGMLNQQLKTQTQLQQQHLENQINNNSQRVLQSQPGERNPARQQMLPNTNGGMLNSNRNPDSSLNQQHMLPERRNGDMLNQPSTPQPDIPLKTIGP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKRLLILTALLPFVGFAQPINTLNNPNQPGYQIPSQQRMQTQMQTQQIQQKGMLNQQLKTQTQLQQQHLENQINNNSQRVLQSQPGERNPARQQMLPNTNGGMLNSNRNPDSSLNQQHMLPERRNGDMLNQPSTPQPDIPLKTIGP
CHHHHHHHHHHHHHHHHCTTTTTTTTTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTCCCCCTTTTTTTTTTTTTTCTTTTTTTTTTC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKRLLILTALLPFVGFAQPINTLNNPNQPGYQIPSQQRMQTQMQTQQIQQKGMLNQQLKTQTQLQQQHLENQINNNSQRVLQSQPGERNPARQQMLPNTNGGMLNSNRNPDSSLNQQHMLPERRNGDMLNQPSTPQPDIPLKTIGP
43211110110000001210212212322223112222222212222122211132213322322222123212221220332222322222222122222111222312322132222123442132213221222312243228
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.590 to 1ik7A
SCOP code=a.77.1.2		 TM-score=0.548 to 1ud0C
SCOP code=a.8.4.1		 TM-score=0.492 to 1qsdA
SCOP code=a.7.5.1		 TM-score=0.507 to 2r2vA
SCOP code=h.1.3.1		 TM-score=0.503 to 1h2sB
SCOP code=f.17.4.1
Estimated TM-score of Model 1: 0.3381 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3755 ±0.0778