QUARK Ab Initio Results for YHAH_ECOLI


  Submitted Primary Sequence

>Length 121
MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKMLGWQRAGGEGILTTIYGILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFNCQAGTPGENRFGPDPKLEP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
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  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKMLGWQRAGGEGILTTIYGILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFNCQAGTPGENRFGPDPKLEP
HHHHHHHHHHHCTTTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHCTTTTEEEEEEHHHHHHHHHHHHHHTTTTTTTTTTTTCCTTTTC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKMLGWQRAGGEGILTTIYGILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFNCQAGTPGENRFGPDPKLEP
2210130022101140100111000000000000000000030001222213000100000000001000102102414311000000001000000000000221231314213224236
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.547 to 2o4tA
SCOP code=a.69.4.1		 TM-score=0.544 to 1eflA
SCOP code=c.2.1.7		 TM-score=0.608 to 1i5pA
SCOP code=b.18.1.3		 TM-score=0.538 to 2i5uA
SCOP code=a.275.1.1		 TM-score=0.587 to 1fbvA
SCOP code=a.39.1.7
Estimated TM-score of Model 1: 0.4089 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4512 ±0.0778