QUARK Ab Initio Results for YGHG_ECOLI

Submitted Primary Sequence

>Length 136
MSIKQMPGRVLISLLLSVTGLLSGCASHNENASLLAKKQAQNISQNLPIKSAGYTLVLAQSSGTTVKMTIISEAGTQTTQTPDAFLTSYQRQMCADPTVKLMITEGINYSITINDTRTGNQYQRKLDRTTCGIVKA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MSIKQMPGRVLISLLLSVTGLLSGCASHNENASLLAKKQAQNISQNLPIKSAGYTLVLAQSSGTTVKMTIISEAGTQTTQTPDAFLTSYQRQMCADPTVKLMITEGINYSITINDTRTGNQYQRKLDRTTCGIVKA
CCHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHTTTTCCCTTTTEEEEETTTTTEEEEEEEETTTTTTTCCHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEETTTTTHHHHHHCCHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSIKQMPGRVLISLLLSVTGLLSGCASHNENASLLAKKQAQNISQNLPIKSAGYTLVLAQSSGTTVKMTIISEAGTQTTQTPDAFLTSYQRQMCADPTVKLMITEGINYSITINDTRTGNQYQRKLDRTTCGIVKA
5523312131000000000000220222331021003200320143020312001000020322101000001122422321310012003210223201200330020101011132122222313321022245
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.505 to 1r1bA SCOP code=a.16.1.3	TM-score=0.469 to 1ldjA SCOP code=a.4.5.34	TM-score=0.478 to 2z15B SCOP code=d.370.1.1	TM-score=0.483 to 1nvpB SCOP code=a.32.1.1	TM-score=0.514 to 1oqvA SCOP code=d.24.1.2

Estimated TM-score of Model 1: 0.3701 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4097 ±0.0778