QUARK Ab Initio Results for YFIM_ECOLI

Submitted Primary Sequence

>Length 107
MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGASTGYTVWQLTRH
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGASTGYTVWQLTRH
CHHHHHHHHHHHHHHHHTTTTTTTTTTTHHHHHHHHHHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHHCCCCCCTTTTHHHHHHHHHHHHHHHHHHHHHHC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGASTGYTVWQLTRH
43310000000000011113121113110100000000000021003221224220000000000001002201222140200001000000000000100111235
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.541 to 1c17M SCOP code=f.18.1.1	TM-score=0.666 to 2hujA SCOP code=a.24.26.1	TM-score=0.542 to 2aplA SCOP code=a.258.1.1	TM-score=0.564 to 1r5qA SCOP code=a.186.1.1	TM-score=0.615 to 1n5uA SCOP code=a.126.1.1

Estimated TM-score of Model 1: 0.5074 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.5565 ±0.0778