QUARK Ab Initio Results for YFDS_ECOLI

Submitted Primary Sequence

>Length 120
MRMNVFEMEGFLRGKCVPRDLKVNETNAEYLVRKFDALEAKCAALENKIIPVSAELPPANESVLLFDANGEGWLIGWRSLWYTWGQKETGEWQWTFQVGDLENVNITHWAVMPKAPEAGA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MRMNVFEMEGFLRGKCVPRDLKVNETNAEYLVRKFDALEAKCAALENKIIPVSAELPPANESVLLFDANGEGWLIGWRSLWYTWGQKETGEWQWTFQVGDLENVNITHWAVMPKAPEAGA
CCEEEETTTTTTTTTTTTTTTTTTTCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCTTTTTTEEETTTTTTEEEEEHHHHHHTTTTTTTTTTEEEEECCTTTTCEEEEEETTTTTTTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRMNVFEMEGFLRGKCVPRDLKVNETNAEYLVRKFDALEAKCAALENKIIPVSAELPPANESVLLFDANGEGWLIGWRSLWYTWGQKETGEWQWTFQVGDLENVNITHWAVMPKAPEAGA
441100113100203001330313322131002102201110011233211010211322310000114130000000000121133321201000100203302000001013235375
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.480 to 2gw6A SCOP code=c.52.2.1	TM-score=0.472 to 2ga5A SCOP code=d.82.2.1	TM-score=0.433 to 1riyA SCOP code=a.55.1.1	TM-score=0.451 to 1riyA SCOP code=a.55.1.1	TM-score=0.479 to 1e8oB SCOP code=d.49.1.1

Estimated TM-score of Model 1: 0.3307 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3675 ±0.0778