QUARK Ab Initio Results for YFBO_ECOLI


  Submitted Primary Sequence

>Length 140
MTPLERITQLVNINGDVNNPDTPRPLLSLEDFFIDNNIHGSICCNVIPEQSPQAIYHHFLKIRERNNVSDVLVEITMFDDPDWPFSESILVITTASPEEVQSWFVEEIAPDECWEGWSEDTEHGWVEVPVGMHPVTCWWD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MTPLERITQLVNINGDVNNPDTPRPLLSLEDFFIDNNIHGSICCNVIPEQSPQAIYHHFLKIRERNNVSDVLVEITMFDDPDWPFSESILVITTASPEEVQSWFVEEIAPDECWEGWSEDTEHGWVEVPVGMHPVTCWWD
CCHHHHHHHHHHTTTTTCTTTTCCCEEEHHHHTTTTCTTTTETTTTCTTTTHHHHHHHHHHHHHTTTTCEEEEEEEETTTTTTTTTTTTEEEECCCHHHHHHHHHCCCCTTTTTTTTTCTTTTTTCCTTTTCEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTPLERITQLVNINGDVNNPDTPRPLLSLEDFFIDNNIHGSICCNVIPEQSPQAIYHHFLKIRERNNVSDVLVEITMFDDPDWPFSESILVITTASPEEVQSWFVEEIAPDECWEGWSEDTEHGWVEVPVGMHPVTCWWD
54222212311312231323321200000210023131210000111223113101210120343331100001001122330110110000010213101101023111230232113223311131321110000015
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.431 to 1mxsA
SCOP code=c.1.10.1		 TM-score=0.422 to 2shpA
SCOP code=c.45.1.2		 TM-score=0.484 to 1r6bX
SCOP code=a.174.1.1		 TM-score=0.483 to 1tqnA
SCOP code=a.104.1.1		 TM-score=0.451 to 2c1gA
SCOP code=c.6.2.3
Estimated TM-score of Model 1: 0.2960 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3304 ±0.0778