QUARK Ab Initio Results for YEDM_ECOLI

Submitted Primary Sequence

>Length 116
MFPLNDLSLKTQPVQLNKVTSNTESTIKQHELVSDDAIINELSSELVSCLGNGKFTPISEDSKLFNMLSEFKLLHSEYFEWGDYSLWFQDFSIYNKIGFIMIEKIRELVTHPFGIN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MFPLNDLSLKTQPVQLNKVTSNTESTIKQHELVSDDAIINELSSELVSCLGNGKFTPISEDSKLFNMLSEFKLLHSEYFEWGDYSLWFQDFSIYNKIGFIMIEKIRELVTHPFGIN
CCTTTTTTTTTTCEEEEEETTTTHHHHHHHHHCCHHHHHHHHHHHHHHHTTTTTTTCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEETTTTTTTTTTTTEEHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFPLNDLSLKTQPVQLNKVTSNTESTIKQHELVSDDAIINELSSELVSCLGNGKFTPISEDSKLFNMLSEFKLLHSEYFEWGDYSLWFQDFSIYNKIGFIMIEKIRELVTHPFGIN
54323323232220101201232321031131022210112002200300231311222212300200210100121003011000001202113310100031012112122134
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.488 to 1n5uA SCOP code=a.126.1.1	TM-score=0.498 to 1sxjE SCOP code=a.80.1.1	TM-score=0.524 to 2ojeD SCOP code=a.202.1.1	TM-score=0.560 to 1fewA SCOP code=a.7.4.1	TM-score=0.477 to 1sxjD SCOP code=a.80.1.1

Estimated TM-score of Model 1: 0.3600 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3988 ±0.0778