QUARK Ab Initio Results for YDGC_ECOLI


  Submitted Primary Sequence

>Length 111
MGLVIKAALGALVVLLIGVLAKTKNYYIAGLIPLFPTFALIAHYIVASERGIEALRATIIFSMWSIIPYFVYLVSLWYFTGMMRLPAAFVGSVACWGISAWVLIICWIKLH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
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  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MGLVIKAALGALVVLLIGVLAKTKNYYIAGLIPLFPTFALIAHYIVASERGIEALRATIIFSMWSIIPYFVYLVSLWYFTGMMRLPAAFVGSVACWGISAWVLIICWIKLH
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MGLVIKAALGALVVLLIGVLAKTKNYYIAGLIPLFPTFALIAHYIVASERGIEALRATIIFSMWSIIPYFVYLVSLWYFTGMMRLPAAFVGSVACWGISAWVLIICWIKLH
431111001000000000001212210011001101100000000012331131021000000000000000000011011123001000000000000000001001323
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.623 to 1t1mC
SCOP code=i.1.1.1		 TM-score=0.716 to 1sj8A
SCOP code=a.215.1.1		 TM-score=0.638 to 2iu5A
SCOP code=a.4.1.9		 TM-score=0.653 to 1fioA
SCOP code=a.47.2.1		 TM-score=0.609 to 1t1mC
SCOP code=i.1.1.1
Estimated TM-score of Model 1: 0.5131 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.5627 ±0.0778