QUARK Ab Initio Results for YDFR_ECOLI

Submitted Primary Sequence

>Length 103
MTQDYELVVKGVRNFENKVTVTVALQDKERFDGEIFDLDVAMDRVEGAALEFYEAAARRSVRQVFLEVAEKLSEKVESYLQHQYSFKIENPANKHERPHHKYL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MTQDYELVVKGVRNFENKVTVTVALQDKERFDGEIFDLDVAMDRVEGAALEFYEAAARRSVRQVFLEVAEKLSEKVESYLQHQYSFKIENPANKHERPHHKYL
CCCEEEEETTTTCCTTTTEEEEEEECTTTTCCCCCCCEEEEETTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCTTTTCEEEEEETTTTTTTTTTTTTTCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTQDYELVVKGVRNFENKVTVTVALQDKERFDGEIFDLDVAMDRVEGAALEFYEAAARRSVRQVFLEVAEKLSEKVESYLQHQYSFKIENPANKHERPHHKYL
5541111112103214320101000224322203001000001223222120021101210220012002301342322222100020322233233233434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.551 to 1wv8A SCOP code=d.304.1.1	TM-score=0.516 to 1rq0A SCOP code=e.38.1.1	TM-score=0.463 to 2daxA SCOP code=d.20.1.3	TM-score=0.470 to 2mhrA SCOP code=a.24.4.1	TM-score=0.490 to 1ukkA SCOP code=d.227.1.1

Estimated TM-score of Model 1: 0.3553 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3938 ±0.0778