QUARK Ab Initio Results for YDFK_ECOLI

Submitted Primary Sequence

>Length 77
MKSKDTLKWFPAQLPEVRIILGDAVVEVAKQGRPINTRTLLDYIEGNIKKKSWLDNKELLQTAISVLKDNQNLNGKM
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--------10--------20--------30--------40--------50--------60--------70

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKSKDTLKWFPAQLPEVRIILGDAVVEVAKQGRPINTRTLLDYIEGNIKKKSWLDNKELLQTAISVLKDNQNLNGKM
CCCCCCCCCTTTTTTCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCTTTTTT
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKSKDTLKWFPAQLPEVRIILGDAVVEVAKQGRPINTRTLLDYIEGNIKKKSWLDNKELLQTAISVLKDNQNLNGKM
55443223212130120100002000101422221123101200201133322132320021002003223323244
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.559 to 1hlvA SCOP code=a.4.1.7	TM-score=0.570 to 1tuaA SCOP code=d.51.1.1	TM-score=0.568 to 1w5tB SCOP code=a.4.5.11	TM-score=0.576 to 1hlvA SCOP code=a.4.1.7	TM-score=0.571 to 1ng6A SCOP code=a.182.1.1

Estimated TM-score of Model 1: 0.4652 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.5114 ±0.0778