QUARK Ab Initio Results for YDFD_ECOLI

Submitted Primary Sequence

>Length 63
MNSAFVLVLTVFLVSGEPVDIAVSVHRTMQECMTAATEQKIPGNCYPVDKVIHQDNIEIPAGL
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--------10--------20--------30--------40--------50--------60

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MNSAFVLVLTVFLVSGEPVDIAVSVHRTMQECMTAATEQKIPGNCYPVDKVIHQDNIEIPAGL
CCHHHHHHHHEEECCCCCEEEEEETTTTHHHHHHHHHHCCTTTTCEEHHHTTTTTTTTTTTTT
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--------10--------20--------30--------40--------50--------60

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNSAFVLVLTVFLVSGEPVDIAVSVHRTMQECMTAATEQKIPGNCYPVDKVIHQDNIEIPAGL
542010010000002231110000013213201100233313120000130023232312324
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--------10--------20--------30--------40--------50--------60

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.485 to 1sfeA SCOP code=a.4.2.1	TM-score=0.475 to 1sfeA SCOP code=a.4.2.1	TM-score=0.464 to 1sfeA SCOP code=a.4.2.1	TM-score=0.499 to 1sfeA SCOP code=a.4.2.1	TM-score=0.486 to 1sfeA SCOP code=a.4.2.1

Estimated TM-score of Model 1: 0.3542 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3927 ±0.0778