QUARK Ab Initio Results for YDCA_ECOLI

Submitted Primary Sequence

>Length 57
MKKLALILFMGTLVSFYADAGRKPCSGSKGGISHCTAGGKFVCNDGSISASKKTCTN
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--------10--------20--------30--------40--------50

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKKLALILFMGTLVSFYADAGRKPCSGSKGGISHCTAGGKFVCNDGSISASKKTCTN
CHHHHHHHHHHHHHHHHHHHCCCCTTTTTTCTTTTTTTTEEETTTTTHHHHHHHHCC
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--------10--------20--------30--------40--------50

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKLALILFMGTLVSFYADAGRKPCSGSKGGISHCTAGGKFVCNDGSISASKKTCTN
442101100000000000212222021231111102221200022022220332134
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--------10--------20--------30--------40--------50

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.542 to 2hr2A SCOP code=a.118.8.8	TM-score=0.543 to 3bzkA SCOP code=a.60.2.6	TM-score=0.546 to 1tfeA SCOP code=d.43.1.1	TM-score=0.530 to 2hr2A SCOP code=a.118.8.8	TM-score=0.569 to 3bzkA SCOP code=a.60.2.6

Estimated TM-score of Model 1: 0.3687 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4081 ±0.0778