QUARK Ab Initio Results for YDBL_ECOLI


  Submitted Primary Sequence

>Length 108
MKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVADINAERKASYQQLAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGINGKWVRKF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
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  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVADINAERKASYQQLAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGINGKWVRKF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEETTTTCEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVADINAERKASYQQLAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGINGKWVRKF
433001100000000001001110310232121022120000004232302300220123022002200442412132003100120033043020011231212224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.592 to 1h2sB
SCOP code=f.17.4.1		 TM-score=0.542 to 1zrlA
SCOP code=a.264.1.1		 TM-score=0.514 to 1bxgA
SCOP code=c.2.1.7		 TM-score=0.516 to 1ldjA
SCOP code=a.4.5.34		 TM-score=0.615 to 1p49A
SCOP code=c.76.1.2
Estimated TM-score of Model 1: 0.4340 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4781 ±0.0778