QUARK Ab Initio Results for YBJH_ECOLI

Submitted Primary Sequence

>Length 94
MIMKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSVPQAVSVATVPQTVYVAPAPAPAYRPHPYVRHLASVGEGMVIEHQIDDHHH
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234
--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MIMKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSVPQAVSVATVPQTVYVAPAPAPAYRPHPYVRHLASVGEGMVIEHQIDDHHH
CCHHHHHHHHHHHHHHCCCHEEEEEEEETTTTCEEEEECCCCCCTTTTEEEECCCEEEECCCCCTTTTTTTHHHHHHHCCCCEEEEEECTTTTC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234
--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIMKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSVPQAVSVATVPQTVYVAPAPAPAYRPHPYVRHLASVGEGMVIEHQIDDHHH
5323101110000020101110100102023112000023212032001002022101002121212211210100030120000112123477
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234
--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.530 to 2dyjA SCOP code=d.52.7.1	TM-score=0.519 to 2h0hB SCOP code=c.47.1.9	TM-score=0.493 to 3ci0I SCOP code=d.24.1.7	TM-score=0.485 to 1g3nC SCOP code=a.74.1.1	TM-score=0.462 to 1q8cA SCOP code=a.79.1.2

Estimated TM-score of Model 1: 0.3431 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3808 ±0.0778